Postdoctoral Researcher in Computational Oncology

Working Environment

A postdoctoral position for 4 years is available within the Computational Oncology group and will be co-supervised by Prof. Rudolf Fehrmann and Dr. Arkajyoti Bhattacharya. The group uses big-data approaches combined with machine learning (ML) to identify molecular, imaging, or clinicopathological patterns relevant to the pathophysiological behaviour and treatment response of tumours. The research group is embedded in the Department of Medical Oncology of the University Medical Center Groningen (UMCG) in the Netherlands, where oncological patient care is coordinated with preclinical and fundamental research on the biology and treatment of cancer.
The Department of Medical Oncology participates in the research institute MoHAD (Mechanisms of Health, Aging and Disease), in which molecular biologists, pharmacists and clinicians work closely together, creating an optimal and excellent environment where the biological behaviour of cancer cells, molecular imaging of tumours and novel approaches to cancer targeting are studied.

Job description

The project is conducted in collaboration with the Group of Prof. Sven Rottenberg (University of Bern) and involves leading computational method development and integrative analyses of large-scale transcriptomic, spatial and functional-genomic datasets from experimental models, patient tumours and public resources to derive biomarkers of ECHDC2-linked metabolic rewiring and uncover targetable vulnerabilities associated with resistance to radiotherapy, chemotherapy and radioligand therapy.
The postdoctoral researcher will take a leading role in developing and applying computational workflows for bulk and single-cell RNA-seq, spatial profiling and functional-genomic data; integrating project-generated data with clinically annotated cohorts and public resources; and deriving robust ECHDC2-associated biomarkers, transcriptional signatures and prioritised targetable vulnerabilities for downstream validation. The postdoctoral researcher is expected to drive the computational strategy of the project, contribute to the supervision of junior researchers, coordinate analyses with collaborators, and disseminate the findings through publications, poster presentations and talks within the UMCG as well as at national and international meetings.

Requirements

The postdoctoral researcher will be part of an enthusiastic and multidisciplinary research group and should meet the following requirements:
- A PhD degree in bioinformatics, computational biology, data science, systems biology, biomedical sciences, artificial intelligence, or a related field;
- Strong experience with transcriptomic or other omics data analysis, statistics, and programming in R and/or Python;
- Experience with computational method development and integrative analysis of large-scale datasets; experience with single-cell and spatial transcriptomics and/or functional-genomic data is an advantage;
- Affinity with machine learning and translational cancer research; experience with clinically annotated cohorts and large public datasets is an advantage;
- A proven ability to work independently and collaboratively in a multidisciplinary environment, with excellent communication skills in written and spoken English;
- A track record of scientific writing and peer-reviewed publication commensurate with career stage.

Conditions of employment

A temporary full-time Postdoctoral Research position (36 hours/week; 1.0 FTE) for 4 years. The initial contract will be for 1 year and, after positive evaluation, this will be extended for 3 additional years. The starting salary depends on qualifications and relevant experience, with a maximum of € 5.867 gross per month based on a full-time appointment (salary scale 10 as of July 1st). In addition, the UMCG offers an 8% holiday allowance, an 8.3% year-end bonus.The conditions of employment comply with the Collective Labour Agreement for Medical Centres (CAO-UMC).
Link
Medical-oncology
Rudolffehrmann.nl/wordpress
umcgresearch.org/w/r-s-n-fehrman

Additional information

For more information about this vacancy you may contact:
Rudolf Fehrmann (+31) 06 5525 6314
[email protected] Arkajyoti Bhattacharya (+31) 050 361 1568
[email protected]

Applying for a job

Solliciteren

Please use the the digital application form at the bottom of this page - only these will be processed. You can apply until 5 May 2026. Within half an hour after sending the digital application form you will receive an email- confirmation with further information.
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